DNA Sequence
Time Limit: 1000MS | Memory Limit: 65536K | |
Total Submissions: 9899 | Accepted: 3717 |
Description
It’s well known that DNA Sequence is a sequence only contains A, C, T and G, and it’s very useful to analyze a segment of DNA Sequence,For example, if a animal’s DNA sequence contains segment ATC then it may mean that the animal may have a genetic disease. Until now scientists have found several those segments, the problem is how many kinds of DNA sequences of a species don’t contain those segments.
Suppose that DNA sequences of a species is a sequence that consist of A, C, T and G,and the length of sequences is a given integer n.
Input
First line contains two integer m (0 <= m <= 10), n (1 <= n <=2000000000). Here, m is the number of genetic disease segment, and n is the length of sequences.
Next m lines each line contain a DNA genetic disease segment, and length of these segments is not larger than 10.
Output
An integer, the number of DNA sequences, mod 100000.
Sample Input
4 3 AT AC AG AA
Sample Output
36
Source
POJ Monthly–2006.03.26,dodo A自动机。 要求长度为n,不包含病毒串的个数。 首先利用AC自动机实现状态的转移。 AC自动机其实就和状态机类似的,可以产生L个状态。 然后根据状态间能不能转移,构造一个矩阵。 最后矩阵快速幂求解
//============================================================================ // Name : HDU.cpp // Author : // Version : // Copyright : Your copyright notice // Description : Hello World in C++, Ansi-style //============================================================================ #include <iostream> #include <stdio.h> #include <string.h> #include <algorithm> #include <queue> using namespace std; struct Matrix { unsigned long long mat[40][40]; int n; Matrix(){} Matrix(int _n) { n=_n; for(int i=0;i<n;i++) for(int j=0;j<n;j++) mat[i][j] = 0; } Matrix operator *(const Matrix &b)const { Matrix ret = Matrix(n); for(int i=0;i<n;i++) for(int j=0;j<n;j++) for(int k=0;k<n;k++) ret.mat[i][j]+=mat[i][k]*b.mat[k][j]; return ret; } }; unsigned long long pow_m(unsigned long long a,int n) { unsigned long long ret=1; unsigned long long tmp = a; while(n) { if(n&1)ret*=tmp; tmp*=tmp; n>>=1; } return ret; } Matrix pow_M(Matrix a,int n) { Matrix ret = Matrix(a.n); for(int i=0;i<a.n;i++) ret.mat[i][i] = 1; Matrix tmp = a; while(n) { if(n&1)ret=ret*tmp; tmp=tmp*tmp; n>>=1; } return ret; } struct Trie { int next[40][26],fail[40]; bool end[40]; int root,L; int newnode() { for(int i = 0;i < 26;i++) next[L][i] = -1; end[L++] = false; return L-1; } void init() { L = 0; root = newnode(); } void insert(char buf[]) { int len = strlen(buf); int now = root; for(int i = 0;i < len;i++) { if(next[now][buf[i]-'a'] == -1) next[now][buf[i]-'a'] = newnode(); now = next[now][buf[i]-'a']; } end[now] = true; } void build() { queue<int>Q; fail[root]=root; for(int i = 0;i < 26;i++) if(next[root][i] == -1) next[root][i] = root; else { fail[next[root][i]] = root; Q.push(next[root][i]); } while(!Q.empty()) { int now = Q.front(); Q.pop(); if(end[fail[now]])end[now]=true; for(int i = 0;i < 26;i++) if(next[now][i] == -1) next[now][i] = next[fail[now]][i]; else { fail[next[now][i]] = next[fail[now]][i]; Q.push(next[now][i]); } } } Matrix getMatrix() { Matrix ret = Matrix(L+1); for(int i = 0;i < L;i++) for(int j = 0;j < 26;j++) if(end[next[i][j]]==false) ret.mat[i][next[i][j]] ++; for(int i = 0;i < L+1;i++) ret.mat[i][L] = 1; return ret; } void debug() { for(int i = 0;i < L;i++) { printf("id = %3d,fail = %3d,end = %3d,chi = [",i,fail[i],end[i]); for(int j = 0;j < 26;j++) printf("%2d",next[i][j]); printf("]\n"); } } }; char buf[10]; Trie ac; int main() { // freopen("in.txt","r",stdin); // freopen("out.txt","w",stdout); int n,L; while(scanf("%d%d",&n,&L)==2) { ac.init(); for(int i = 0;i < n;i++) { scanf("%s",buf); ac.insert(buf); } ac.build(); Matrix a = ac.getMatrix(); a = pow_M(a,L); unsigned long long res = 0; for(int i = 0;i < a.n;i++) res += a.mat[0][i]; res--; /* * f[n]=1 + 26^1 + 26^2 +...26^n * f[n]=26*f[n-1]+1 * {f[n] 1} = {f[n-1] 1}[26 0;1 1] * 数是f[L]-1; * 此题的L<2^31.矩阵的幂不能是L+1次,否则就超时了 */ a = Matrix(2); a.mat[0][0]=26; a.mat[1][0] = a.mat[1][1] = 1; a=pow_M(a,L); unsigned long long ans=a.mat[1][0]+a.mat[0][0]; ans--; ans-=res; cout<<ans<<endl; } return 0; }